CDS
| Accession Number | TCMCG017C12276 |
| gbkey | CDS |
| Protein Id | OMO98149.1 |
| Location | complement(join(31442..31561,32289..32363,32695..32920,33080..33168,33258..33351,33538..33722,33800..33967,34038..34178,34636..34854,34985..35101,36308..36404,36673..36764,36912..36974,37212..37271,37372..37536,37613..37798,37894..38184,38289..38432,38657..39337,39492..39814,40714..40913,41159..41268,41637..41726,41832..41930,42017..42130,42309..42422)) |
| GeneID | InterPro:IPR003395 |
| Organism | Corchorus olitorius |
| locus_tag | COLO4_14108 |
Protein
| Length | 1420aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA215141, BioSample:SAMN03160584 |
| db_source | AWUE01015378.1 |
| Definition | RecF/RecN/SMC [Corchorus olitorius] |
| Locus_tag | COLO4_14108 |
EGGNOG-MAPPER Annotation
| COG_category | BD |
| Description | Structural maintenance of chromosomes protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K06674
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko04111
[VIEW IN KEGG] map04111 [VIEW IN KEGG] |
| GOs |
GO:0000793
[VIEW IN EMBL-EBI] GO:0000796 [VIEW IN EMBL-EBI] GO:0003674 [VIEW IN EMBL-EBI] GO:0005215 [VIEW IN EMBL-EBI] GO:0005575 [VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005694 [VIEW IN EMBL-EBI] GO:0032991 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044427 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0044815 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGCAGAAAGGGATCCAGCAGCTGCAGCAGCTCAAAAGTACAAACCAATACAATCTGCCGTTCCTGGGACTACCTTGGGTCCAATTCAGATTAATGCATTTCTTGGAGGAGGGAAATTGTATGATACACCTGGAGTTCATCTTCATCATAGGCAAGCTGCAGTAGTTCACTCAGAAGATTTACCTGTCCTTGCTCCTCGAAGTCGCCTCCGAGGTCAATCGTTCCCTGCAGCCTCCAAAAATGGGATGGTAGGGACATTCAACTCCAATGGCTTAAAAGGTTTCTCAATATTTTGGGGTGGTCTTGTCAGAATTGATGTCTTGGAGGCTCTCCCAGAGACATGTTTGATATTTTATGGACCAAAGGGATTGCGCATTCATGTTATACCAACTGATGAAGCAGATGAATTTTACAAGAAAGAACTTGGAGTACTGTTGACACCGCCAACTGGAAAAGACAAAGCAGATGAATGGAGAGGACTAGAGACAGTAGAGCAATTAAAAATAAAATTTGAAGATGCTGAAAGACCTGCCACTGATGTGGCTATTTCAGGACTGGGTTGGATCACCATTGAACCGAAAAGCAAGTCTTTTGGAATTTCTGAAAGTAATATTGCAGATACCATCAATGAATTGCATTTGGCAGTCCATGTACCCAAGCCAGTTGAAGTTTTCGTTCGGCCTCCTATTCCAGTAGGCAAGGCCGGAGCAGAATGGTACCAATATCGCGCGATGCACATCAAGGAGATATGTTTGGAAGGATTTAAATCCTATGCGACGAGGACGGTTGTCCCTGGCTTCGATCCATTCTTTAACGCCATAACGGGTTTGAATGGGTCGGGAAAATCGAACATTCTGGACTCTATTTGCTTTGTTTTAGGAATCACCAATTTGCAGCAAGTTCGAGCTGCAAATCTACAAGAGCTCGTTTACAAGCAAGGCCAAGCTGGAATTACCAAGGCCACGGTCTCCGTTATCTTTGATAACTCAGATAGATCCCGAAGTCCACTTGGTTACGAGGATCATTCAGAGATTACTGTAACTCGACAAATTGTGGTTGGTGGTAGGAACAAATATTTGATCAATGGAAAGCTAGCACAGCCGAGTCAAGTACAGAACCTTTTCCATTCAGTTCAGCTTAATGTTAATAATCCACATTTTCTCATAATGCAAGGTCGGATCACCAAAGTTTTAAATATGAAACCTCCTGAGATTCTATCTATGCTTGAAGAGGCTGCTGGTACTAGAATGTATGAAACAAAAAAAGAGTTTGCGTTAAAAACACTTGAGAAGAAACAGAGTAAGGTTGATGAGATTAATAAGCTTCTTGATCAGGAAATACTGCCGGCTTTGGAGAAGTTGAGAAAAGAACGAACCCAGTATATGCAATGGGCTAATGGGAATGCAGAGCTTGATAGACTTAAAAGGTTTTGTGTTGCTTACGAGTATGTTCAAGCAGAGCGAATTAGAGATAGTGCAGTTGGTGAAGTGGAAAGAGTAAAGGCAAAGATTATGGAAATTGATAATGATACAGAAAGGACAATGGTGGAAATTCAGGATATGGAGACAAACATAGCGAAGTTGACTGCTGAAAGGGAAGCAACTATGGGTGGGGAAGTTAAAACTTTGTCAGATGAAGTAGATTTACTATCTAAAAATATTGTTCAGGAAGTGTCTGTGCTGCACTGTAAAGAGGATACTCTCAAGGGTGAGAAAGAGAATGCTGAAAAGATTGTACAAAATATTGAAGATTTGAGGCAGTCTATAGAAGAGAAGGGTATTGCAGTGCAGAAGTCTGAAGAAGGAGCAGCTGACCTGAAAAAAAGAGTTGAGGATCTTTCTAAGAGTTTGGAAGAAAATGAAAGGGAATACCAGGCTGTCCAAGCTGGCAAGAACAGCGGCAATGAGGAGAAATGCCTAGAAGATCAACTAGTTGATGCTAAAGTTGCTGTTGGGACTGCTGAAACGGAATTGAAACAGCTGAAAACTAAAATTACCCATTGTGAAAAGGAGCTGGGGGAGAAAACACGCCAATTGATGTCAAAGCGTGAAGAAGCAGTTGGTGTGGAGAATGAGCTTAACTCCAGGCGAAATGATGTGGAGAGAATTCAAACTGAGTTGGAATCTCTTCCTTATAAAGAAGGCCAGATGGAAGCACTGCAAAAGGATCGCGCATCTGAGTTGGAGATGATCCAGAAGTTGAAAGATGGAGTGCGAGATCTTTCAGCACGCCTATCAAATGTTCAGTTCACTTATCGCGATCCAGAGAAGAATTTTGATAGGTCAAGGGTGAAAGGAGTAGTTGCAAAACTAATAAAAGTGAAGGATAGCTCAACCATGACAGCCTTGGAGGTTACTGCAGGTGGAAAGTTATATAATGTGGTTGTTGACACTGAAAATACTGGAAAGCAACTACTTCAGAAGGGTGATCTACGAAGAAGGGTAACAATTATACCTTTGAACAAAATTCAACCTAATACGGTTCCCCCTAGGGTTCAGCAGGCTGCTATTAGATTGGTTGGCAAGGAGAATGCAAAGCTGGCACTTTCCTTGGTTGGTTATGATAAGGAATTGGAGAGTGCCATGGAATATGTATTTGGTGCTAATTTTGTATGTAAAACTACTGATGCTGCAAAGGAGGTTGCTTTTAGTCGAGAAATTCGCACTCCTAGTGTCACACTTGAAGGTGATATATTTCAACCTAGTGGTCTTTTGACTGGTGGAAGTCGCAGGGGTGGTGGTGATTTGCTACGGCAACTTCATGATATGGCAGAGTGTGAATCAAAACTTTCCGTACATCAGAAGAGGTTATCTGAAATCGAGGCAAAGATCGCAGATCTCCTGCCACTTCAGAAAAGGTTCATGGACCTTAAAGCACAGTTAGAACTTAAAATGCACGACCTTTCCTTATTTCAGAGCAGAGCAGAGAAAAATGAGCATCATAAGCTTGGAGAAATGGTAAAGAGCATTGAGAAAGATCTTGAAGAAGCAAAATCAGCTATTAAAGAGAAACAGAGTTTGTATGAAAAGCATGTTAGCAAGGTTTTGGAACTTGAGAAATCAATTAGGGAGCATGATAATAGTAGGGAGGGCAGACTTAAAGATTTGGAGAGAAAGATTAAGGCTACAAAATCTCAAATGCAGTCTGATTCAAAGGATCTTAAGCGGCATGAAAATGAAAGAGAGAGACTTGTTATGGAACGGGAAGCAGTTGTGCAAGAACAAGCATCTTTAGAGAGTCAATTGGCTTCTTTGAGAACACAAATTAACAATCTTAATTTGGAAGTAGACGAACAATTGGCCAAGGTTAATTCTATAAAAAAGAATCGTGATCAATTGCAATCTCAGTTAGATTCGATACGTTTAAAGATGAAAGAGTGTGATTCTCAAATTAGCAGCATTCTTAAGGAGCAGCAAAAACTTCAGCACAAGCTTAGTGAGACAAAGCTTCAGAGAAAAAAGTTGGAAAATGAGGTAAAGCAAATGGAGATGGAGCAGAAAGATTGTTCTACAAAAGTAGACAAACTGATTGAGAAGCATGCCTGGATTGCTACTGAAAAGCAGCTTTTTGGCAGAAGTGGGACTGATTATGATTTTGCCTCCCGTGATCCTCGTAAAGCCAGGGAAGAACTTGACAAACTTCAAGCTGAACAATCAAGTCTTGAGAAAAGAGTAAACAAGAAAGTGATGGCAATGTTTGAAAAGGCAGAAGACGAGTATAATGATTTGATGTCCAAGAAAAATACTGTGGAGAATGACAAATCTAAAATTAAGAAGACGATTGAAGAGCTAGATGAGAAGAAGAAGGAAACATTAAAGGTCACGTGGGTCAAAGTTAACAATGACTTTGGATCCATCTTTTCTACTCTGTTGCCGGGAACCATGGCAAAGCTAGAACCGCCAGAAGGTTGTAGCTTCTTAGATGGTCTTGAGGTTCGTGTTGCATTTGGAAGTGTTTGGAAACAGTCCTTGTCTGAACTGAGTGGAGGTCAAAGGTCTCTACTTGCACTTTCTCTGATCTTGGCTCTGCTACTGTTTAAGCCAGCTCCACTTTATATACTTGATGAGGTTGATGCAGCTCTTGATCTAAGCCACACTCAGAACATAGGGAGAATGATTAAAGCCCACTTTCCACACTCTCAGTTTATCGTTGTTTCACTGAAAGAGGGCATGTTTAACAATGCTAACGTTCTTTTCCGGACAAAATTCGTGGATGGCGTTTCCACGGTCCAGAGGACTGTTGCAGCGAAGCCAAGCAGGTAA |
| Protein: MAERDPAAAAAQKYKPIQSAVPGTTLGPIQINAFLGGGKLYDTPGVHLHHRQAAVVHSEDLPVLAPRSRLRGQSFPAASKNGMVGTFNSNGLKGFSIFWGGLVRIDVLEALPETCLIFYGPKGLRIHVIPTDEADEFYKKELGVLLTPPTGKDKADEWRGLETVEQLKIKFEDAERPATDVAISGLGWITIEPKSKSFGISESNIADTINELHLAVHVPKPVEVFVRPPIPVGKAGAEWYQYRAMHIKEICLEGFKSYATRTVVPGFDPFFNAITGLNGSGKSNILDSICFVLGITNLQQVRAANLQELVYKQGQAGITKATVSVIFDNSDRSRSPLGYEDHSEITVTRQIVVGGRNKYLINGKLAQPSQVQNLFHSVQLNVNNPHFLIMQGRITKVLNMKPPEILSMLEEAAGTRMYETKKEFALKTLEKKQSKVDEINKLLDQEILPALEKLRKERTQYMQWANGNAELDRLKRFCVAYEYVQAERIRDSAVGEVERVKAKIMEIDNDTERTMVEIQDMETNIAKLTAEREATMGGEVKTLSDEVDLLSKNIVQEVSVLHCKEDTLKGEKENAEKIVQNIEDLRQSIEEKGIAVQKSEEGAADLKKRVEDLSKSLEENEREYQAVQAGKNSGNEEKCLEDQLVDAKVAVGTAETELKQLKTKITHCEKELGEKTRQLMSKREEAVGVENELNSRRNDVERIQTELESLPYKEGQMEALQKDRASELEMIQKLKDGVRDLSARLSNVQFTYRDPEKNFDRSRVKGVVAKLIKVKDSSTMTALEVTAGGKLYNVVVDTENTGKQLLQKGDLRRRVTIIPLNKIQPNTVPPRVQQAAIRLVGKENAKLALSLVGYDKELESAMEYVFGANFVCKTTDAAKEVAFSREIRTPSVTLEGDIFQPSGLLTGGSRRGGGDLLRQLHDMAECESKLSVHQKRLSEIEAKIADLLPLQKRFMDLKAQLELKMHDLSLFQSRAEKNEHHKLGEMVKSIEKDLEEAKSAIKEKQSLYEKHVSKVLELEKSIREHDNSREGRLKDLERKIKATKSQMQSDSKDLKRHENERERLVMEREAVVQEQASLESQLASLRTQINNLNLEVDEQLAKVNSIKKNRDQLQSQLDSIRLKMKECDSQISSILKEQQKLQHKLSETKLQRKKLENEVKQMEMEQKDCSTKVDKLIEKHAWIATEKQLFGRSGTDYDFASRDPRKAREELDKLQAEQSSLEKRVNKKVMAMFEKAEDEYNDLMSKKNTVENDKSKIKKTIEELDEKKKETLKVTWVKVNNDFGSIFSTLLPGTMAKLEPPEGCSFLDGLEVRVAFGSVWKQSLSELSGGQRSLLALSLILALLLFKPAPLYILDEVDAALDLSHTQNIGRMIKAHFPHSQFIVVSLKEGMFNNANVLFRTKFVDGVSTVQRTVAAKPSR |